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Biotechnology Information tblastn programs
Tblastn Programs, supplied by Biotechnology Information, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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tblastn programs - by Bioz Stars, 2026-10
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Article Title: Intron loss in interferon genes follows a distinct set of stages, and may confer an evolutionary advantage.
Article Snippet: http://dx.doi.org/10.1016/j.cyto.2016.04.018 1043-4666/ 2016 Elsevier Ltd. All rights reserved.. Abbreviations: DSB, double-stranded break; IFN, interferon; IFN-a, interferonalpha; IFN-c, interferon-gamma; IFN-k, interferon-lambda; IL, interleukin; ORF, open reading frame; UTR, untranslated region.. ⇑ Address: Department of Biochemistry and Molecular Biology, Rutgers – Robert Wood Johnson Medical School, Piscataway, NJ, USA.

Article Title: Uncovering the Chemosensory System of a Subterranean Termite, Odontotermes formosanus (Shiraki) (Isoptera: Termitidae): Revealing the Chemosensory Genes and Gene Expression Patterns.
Article Snippet: The NCBI (National Center for Biotechnology Information)’s BLASTx and tBLASTn programs were then used to independently verify each candidate unigene encoding OBPs, CSPs, ORs, GRs, and SNMPs at http://blast.ncbi.nlm.nih.gov/Blast.cgi (accessed on 1 July 2023).

Article Title: In silico analysis and designing gRNA constructs for the precise modification of the OsTMS5 gene in rice (Oryza sativa L.): a comprehensive study and construct development for crop improvement
Article Snippet: The CRISPR/Cas9 system represents a state-of-the-art technology for precise genome editing in plants.. In this study, we performed in silico and evolutionary analyses, as well as designed guide RNA (gRNA) constructs for the precise modification of the thermosensitive genic male sterile (OsTMS5) gene using the CRISPR/Cas9 system in rice (Oryza sativa L.).. The OsTMS5 promoter harbours a diverse array of cis-elements, which are linked to light responsiveness, hormonal regulation, and stress-related signaling.

Article Title: Genetic improvement of xylose metabolism by enhancing the expression of pentose phosphate pathway genes in Saccharomyces cerevisiae IR-2 for high-temperature ethanol production.
Article Snippet: The depletion of fossil energy has become global and has been a driving force in the search for renewable energy sources like biofuels.. Commercial production of first generation biofuels, especially bioethanol, utilized traditional microbiological and fermentation technologies.. These biofuels were obtained directly from the abundant starch and d-glucose stores contained in food crops.

Sequencing:

Article Title: Cloning and functional expression of intracellular loop variants of the honey bee (Apis mellifera) RDL GABA receptor.
Article Snippet: .. In order to clone the full length Amel_Rdl subunit, the TBLASTN program was used to search A. mellifera RefSeq data at the National Center for Biotechnology Information (http://www.ncbi.nlm.nih.gov/) using the previously published Amel_RDL peptide (Jones and Sattelle, 2006) as the query sequence. ..

Article Title: Transient Overexpression of HvSERK2 Improves Barley Resistance to Powdery Mildew
Article Snippet: .. To identify SERK genes in barley, the amino acid sequences of reported SERK proteins in model plants including Arabidopsis (NP_177328.1, AAK68073.1, AAK68074.1, NP_178999.2, and NP_179000.3) and rice (BAD05545.1 and XP_015636497.1) were used to search in the International Barley Sequencing Consortium ( http://webblast.ipk-gatersleben.de/barley/ ), and the National Centre for Biotechnology Information (NCBI) database ( http://www.ncbi.nim.nih.gov/BLAST/nr/EST ) using the TBLASTN program with a cut off E-value of 1 × 10 −10 . ..

Article Title: Genome-Wide Characterization, Evolution, and Expression Profile Analysis of GATA Transcription Factors in Brachypodium distachyon
Article Snippet: .. To further determine the chromosome position distribution of BdGATA genes, we utilized the tblastn program of the National Center for Biotechnology Information database to search for the nucleotide sequence of each BdGATA gene. ..



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